The embedding as defined in Dhillon, Inderjit S. "Co-clustering documents and words using bipartite spectral graph partitioning." Proceedings of the seventh ACM SIGKDD international conference on Knowledge discovery and data mining. ACM, 2001.

Source: R/run_corgi.R

The embedding as defined in Dhillon, Inderjit S. "Co-clustering documents and words using bipartite spectral graph partitioning." Proceedings of the seventh ACM SIGKDD international conference on Knowledge discovery and data mining. ACM, 2001.

dhillon_emb(X, Y, k)

Arguments

X

gene-by-cell expression matrix for batch 1
Y

gene-by-cell expression matrix for batch 2
k

k-1 is the dimension of the latent embedding