The user friendly version of corgi

Source: R/run_corgi.R

The user friendly version of corgi

corgi(X, Y, run_time = 2 * 60 * 60, must_have_genes = c(), k = 3,
  fast = T)

Arguments

X

gene-by-cell expression matrix for batch 1
Y

gene-by-cell expression matrix for batch 2
run_time

how long to run for
must_have_genes

the set of marker genes that is used in every sampled gene set

Value

a list of scores